Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DW921_08800 | Not Available | Positive | 2042577 - 2043185 | 22422.6 |
| glycosyltransferase family 2 protein | DW921_08805 | Not Available | Positive | 2043187 - 2044032 | 32849.5 |
| serine acetyltransferase | DW921_08810 | Not Available | Positive | 2043996 - 2044577 | 21037.8 |
| glycosyltransferase | DW921_08815 | Not Available | Positive | 2044582 - 2045475 | 34631.2 |
| hypothetical protein | DW921_08820 | Not Available | Positive | 2045489 - 2046418 | 36482.9 |
| hypothetical protein | DW921_08825 | Not Available | Positive | 2046435 - 2047313 | 34058.9 |
| glycosyltransferase family 1 protein | DW921_08830 | Not Available | Positive | 2047310 - 2048530 | 46850.5 |
| hypothetical protein | DW921_08835 | Not Available | Positive | 2048537 - 2049799 | 48241.6 |
| glycosyltransferase | DW921_08840 | Not Available | Positive | 2049804 - 2050712 | 34633.6 |
| eama/rhat family transporter | DW921_08845 | Not Available | Positive | 2050754 - 2051047 | 10369.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


