Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide export protein | DW921_08750 | Not Available | Positive | 2030758 - 2031552 | 28981.0 |
| tyrosine protein kinase | DW921_08755 | Not Available | Positive | 2031560 - 2033968 | 89490.3 |
| hypothetical protein | DW921_08760 | Not Available | Positive | 2034000 - 2035541 | 57609.2 |
| glycosyltransferase | DW921_08765 | Not Available | Positive | 2035531 - 2036340 | 31267.5 |
| glycosyltransferase family 2 protein | DW921_08770 | Not Available | Positive | 2036340 - 2037314 | 38410.2 |
| hypothetical protein | DW921_08775 | Not Available | Positive | 2037311 - 2038306 | 38969.8 |
| hypothetical protein | DW921_08780 | Not Available | Positive | 2038303 - 2039289 | 37554.8 |
| polysaccharide pyruvyl transferase family protein | DW921_08785 | Not Available | Positive | 2039273 - 2040160 | 34329.8 |
| hypothetical protein | DW921_08790 | Not Available | Positive | 2040165 - 2041337 | 45660.9 |
| glycosyltransferase | DW921_08795 | Not Available | Positive | 2041343 - 2042587 | 47617.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


