Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_08240 | Not Available | Negative | 1919846 - 1921003 | 43931.4 |
| hypothetical protein | DW921_08245 | Not Available | Negative | 1921023 - 1921694 | 24056.2 |
| porin | DW921_08250 | Not Available | Negative | 1921759 - 1922973 | 44676.4 |
| thiol oxidoreductase | DW921_08255 | Not Available | Negative | 1923000 - 1924424 | 53028.4 |
| peptidase m75 | DW921_08260 | Not Available | Negative | 1924523 - 1925707 | 43138.1 |
| hypothetical protein | DW921_08265 | Not Available | Negative | 1925732 - 1927096 | 50577.4 |
| hypothetical protein | DW921_08270 | Not Available | Negative | 1927652 - 1929277 | 63697.4 |
| tonb-dependent receptor | DW921_08275 | Not Available | Positive | 1929607 - 1931883 | 85248.2 |
| alpha-galactosidase | DW921_08280 | Not Available | Positive | 1931938 - 1934127 | 82867.0 |
| ahpc/tsa family protein | DW921_08285 | Not Available | Negative | 1934251 - 1935426 | 44097.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


