Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylinositol-4-phosphate 5-kinase | DW921_07985 | Not Available | Positive | 1861682 - 1862803 | 42579.6 |
| inositol monophosphatase | DW921_07990 | Not Available | Positive | 1862800 - 1863594 | 29369.9 |
| 1,4-alpha-glucan-branching enzyme | DW921_07995 | Not Available | Positive | 1863671 - 1865683 | 77745.1 |
| hypothetical protein | DW921_08000 | Not Available | Positive | 1865687 - 1866841 | 44629.6 |
| 6-bladed beta-propeller | DW921_08005 | Not Available | Positive | 1866902 - 1867930 | 38558.5 |
| proline--trna ligase | DW921_08010 | Not Available | Positive | 1868139 - 1869629 | 56856.0 |
| dmt family transporter | DW921_08015 | Not Available | Negative | 1869721 - 1870566 | 30942.7 |
| mbl fold metallo-hydrolase | DW921_08020 | Not Available | Positive | 1870770 - 1871585 | 30685.1 |
| nif3-like dinuclear metal center hexameric protein | DW921_08025 | Not Available | Positive | 1871725 - 1872819 | 40539.0 |
| hypothetical protein | DW921_08030 | Not Available | Positive | 1872824 - 1873621 | 30882.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


