Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_07605 | Not Available | Positive | 1767430 - 1768269 | 31504.6 |
| hypothetical protein | DW921_07610 | Not Available | Positive | 1768277 - 1768480 | 7989.72 |
| hypothetical protein | DW921_07615 | Not Available | Negative | 1768506 - 1769438 | 36150.2 |
| hypothetical protein | DW921_07620 | Not Available | Positive | 1769589 - 1769828 | 8874.84 |
| duf1573 domain-containing protein | DW921_07625 | Not Available | Positive | 1769855 - 1770718 | 32997.6 |
| hypothetical protein | DW921_07630 | Not Available | Positive | 1770914 - 1771147 | 8244.79 |
| 6-bladed beta-propeller | DW921_07635 | Not Available | Positive | 1771232 - 1772371 | 43719.9 |
| 6-bladed beta-propeller | DW921_07645 | Not Available | Positive | 1773177 - 1774313 | 42779.1 |
| signal peptidase i | DW921_07650 | Not Available | Positive | 1774325 - 1775206 | 34223.4 |
| o-antigen ligase domain-containing protein | DW921_07655 | Not Available | Positive | 1775449 - 1776864 | 53087.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


