Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_07500 | Not Available | Negative | 1744126 - 1745409 | 47047.3 |
| type iii pantothenate kinase | DW921_07505 | Not Available | Negative | 1745399 - 1746124 | 26947.8 |
| duf4105 domain-containing protein | DW921_07510 | Not Available | Positive | 1746271 - 1747458 | 45559.4 |
| alkaline phosphatase family protein | DW921_07515 | Not Available | Positive | 1747455 - 1749038 | 59421.6 |
| preprotein translocase subunit seca | DW921_07520 | Not Available | Positive | 1749142 - 1752447 | 125335.0 |
| tetratricopeptide repeat protein | DW921_07525 | Not Available | Positive | 1752613 - 1753602 | 36449.3 |
| hypothetical protein | DW921_07530 | Not Available | Positive | 1753667 - 1754116 | 16960.0 |
| mbl fold metallo-hydrolase | DW921_07535 | Not Available | Positive | 1754129 - 1755127 | 38465.4 |
| hypothetical protein | DW921_07540 | Not Available | Positive | 1755489 - 1755701 | 7449.17 |
| hypothetical protein | DW921_07545 | Not Available | Positive | 1755779 - 1756828 | 39961.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


