Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DW921_06900 | Not Available | Negative | 1564785 - 1566854 | 78408.0 |
| arac family transcriptional regulator | DW921_06905 | Not Available | Positive | 1567034 - 1567846 | 31400.1 |
| 30s ribosomal protein s15 | DW921_06910 | Not Available | Negative | 1567928 - 1568197 | 10425.6 |
| cation transporter | DW921_06915 | Not Available | Negative | 1568309 - 1569304 | 36935.0 |
| duf418 domain-containing protein | DW921_06920 | Not Available | Positive | 1569476 - 1570648 | 45003.7 |
| translational gtpase typa | DW921_06925 | Not Available | Positive | 1570762 - 1572567 | 67537.6 |
| glycosyltransferase | DW921_06930 | Not Available | Negative | 1572690 - 1573640 | 35454.2 |
| gtra family protein | DW921_06935 | Not Available | Negative | 1573637 - 1574032 | 15046.8 |
| dolichyl-phosphate-mannose--protein mannosyltransferase | DW921_06940 | Not Available | Negative | 1574025 - 1575746 | 64740.0 |
| glycosyltransferase | DW921_06945 | Not Available | Negative | 1575762 - 1576577 | 31223.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


