Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_06430 | Not Available | Positive | 1460061 - 1460276 | 8015.73 |
| duf2589 domain-containing protein | DW921_06435 | Not Available | Positive | 1460277 - 1460990 | 25972.6 |
| hypothetical protein | DW921_06440 | Not Available | Positive | 1461315 - 1461494 | 6870.27 |
| hypothetical protein | DW921_06445 | Not Available | Positive | 1461810 - 1463360 | 57886.5 |
| hypothetical protein | DW921_06450 | Not Available | Positive | 1463341 - 1464321 | 38596.2 |
| hypothetical protein | DW921_06455 | Not Available | Positive | 1464846 - 1465835 | 38495.8 |
| acyltransferase | DW921_06460 | Not Available | Positive | 1465823 - 1466449 | 23549.7 |
| hypothetical protein | DW921_06465 | Not Available | Positive | 1466470 - 1467441 | 37971.8 |
| hypothetical protein | DW921_06470 | Not Available | Positive | 1467620 - 1468819 | 46311.6 |
| glycosyltransferase | DW921_06475 | Not Available | Positive | 1468912 - 1469817 | 35343.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


