Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| meta domain-containing protein | DW921_05105 | Not Available | Positive | 1137892 - 1138698 | 28519.5 |
| dna-binding response regulator | DW921_05110 | Not Available | Negative | 1138761 - 1139537 | 30221.4 |
| hypothetical protein | DW921_05115 | Not Available | Negative | 1139530 - 1140585 | 41247.2 |
| Trna-lys | Not Available | Not Available | Positive | 1142899 - 1142974 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 1142990 - 1143061 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 1143087 - 1143161 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 1143397 - 1143471 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 1143497 - 1143571 | Not Available |
| feob-associated cys-rich membrane protein | DW921_05155 | Not Available | Negative | 1143648 - 1143830 | 6763.39 |
| ferrous iron transport protein b | DW921_05160 | Not Available | Negative | 1143841 - 1146333 | 93569.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


