Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | DXA34_05010 | Not Available | Negative | 1073765 - 1074499 | 28165.8 |
| cation:proton antiporter | DXA34_05015 | Not Available | Negative | 1074807 - 1076423 | 58697.8 |
| had-iia family hydrolase | DXA34_05020 | Not Available | Negative | 1076461 - 1077276 | 29651.5 |
| duf1667 domain-containing protein | DXA34_05025 | Not Available | Negative | 1077321 - 1077683 | 12765.7 |
| fad-dependent oxidoreductase | DXA34_05030 | Not Available | Negative | 1077683 - 1078948 | 46325.0 |
| fad/nad(p)-binding oxidoreductase | DXA34_05035 | Not Available | Negative | 1078960 - 1080396 | 51580.8 |
| hypothetical protein | DXA34_05040 | Not Available | Positive | 1080675 - 1080911 | 8471.49 |
| formate/nitrite transporter family protein | DXA34_05045 | Not Available | Negative | 1080930 - 1081751 | 28852.2 |
| formate--tetrahydrofolate ligase | DXA34_05050 | Not Available | Negative | 1081875 - 1083542 | 59531.0 |
| methenyltetrahydrofolate cyclohydrolase | DXA34_05055 | Not Available | Negative | 1083599 - 1084237 | 22132.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
