Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase | DXA34_04960 | Not Available | Negative | 1062223 - 1062975 | 28014.4 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | DXA34_04965 | Not Available | Negative | 1063219 - 1063761 | 19619.6 |
| type ii secretion system f family protein | DXA34_04970 | Not Available | Negative | 1063877 - 1065094 | 44751.1 |
| type iv pilus twitching motility protein pilt | DXA34_04975 | Not Available | Negative | 1065108 - 1066166 | 38862.1 |
| type ii secretion system protein gspe | DXA34_04980 | Not Available | Negative | 1066170 - 1067888 | 64038.7 |
| glycerol kinase | DXA34_04985 | Not Available | Negative | 1068260 - 1069756 | 55163.5 |
| glycerol-3-phosphate responsive antiterminator | DXA34_04990 | Not Available | Negative | 1069807 - 1070373 | 20513.5 |
| trap transporter large permease | DXA34_04995 | Not Available | Negative | 1070736 - 1072019 | 45878.5 |
| trap transporter small permease | DXA34_05000 | Not Available | Negative | 1072020 - 1072520 | 18618.3 |
| c4-dicarboxylate abc transporter substrate-binding protein | DXA34_05005 | Not Available | Negative | 1072632 - 1073696 | 38696.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
