Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | DXA34_04900 | Not Available | Negative | 1041527 - 1042655 | 43050.7 |
| preprotein translocase subunit seca | DXA34_04915 | Not Available | Negative | 1043727 - 1046384 | 100921.0 |
| ribosome-associated translation inhibitor raia | DXA34_04920 | Not Available | Positive | 1047223 - 1047750 | 20372.6 |
| duf5057 domain-containing protein | DXA34_04925 | Not Available | Negative | 1047900 - 1053203 | 198598.0 |
| prepilin-type cleavage/methylation domain-containing protein | DXA34_04930 | Not Available | Negative | 1053270 - 1054055 | 28291.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | DXA34_04935 | Not Available | Negative | 1054184 - 1054756 | 20605.5 |
| hypothetical protein | DXA34_04940 | Not Available | Negative | 1054753 - 1057164 | 86927.1 |
| prepilin-type cleavage/methylation domain-containing protein | DXA34_04945 | Not Available | Negative | 1057228 - 1058586 | 49423.0 |
| hypothetical protein | DXA34_04950 | Not Available | Negative | 1058668 - 1059750 | 40956.4 |
| hypothetical protein | DXA34_04955 | Not Available | Negative | 1059747 - 1061906 | 78285.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
