Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_04850 | Not Available | Negative | 1029101 - 1030021 | 33408.0 |
| lysr family transcriptional regulator | DXA34_04855 | Not Available | Positive | 1030551 - 1031489 | 35868.4 |
| rna-binding transcriptional accessory protein | DXA34_04860 | Not Available | Negative | 1031582 - 1033723 | 79583.4 |
| pyruvate formate lyase-activating protein | DXA34_04865 | Not Available | Positive | 1034079 - 1034837 | 28152.1 |
| formate c-acetyltransferase | DXA34_04870 | Not Available | Positive | 1034824 - 1037067 | 83408.7 |
| duf4190 domain-containing protein | DXA34_04875 | Not Available | Positive | 1037211 - 1037609 | 14091.3 |
| duf2752 domain-containing protein | DXA34_04880 | Not Available | Negative | 1037742 - 1038098 | 13050.7 |
| aspartate kinase | DXA34_04885 | Not Available | Negative | 1038129 - 1039337 | 43811.1 |
| homoserine dehydrogenase | DXA34_04890 | Not Available | Negative | 1039598 - 1040806 | 43958.1 |
| act domain-containing protein | DXA34_04895 | Not Available | Negative | 1040812 - 1041255 | 16730.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
