Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_04795 | Not Available | Positive | 1016567 - 1017349 | 28001.9 |
| hypothetical protein | DXA34_04800 | Not Available | Negative | 1017346 - 1017558 | 7710.31 |
| mate family efflux transporter | DXA34_04805 | Not Available | Positive | 1017681 - 1019069 | 50553.4 |
| duf4026 domain-containing protein | DXA34_04810 | Not Available | Positive | 1019103 - 1020332 | 46812.1 |
| gnat family n-acetyltransferase | DXA34_04815 | Not Available | Positive | 1020493 - 1021347 | 32542.4 |
| alginate o-acetyltransferase | DXA34_04820 | Not Available | Negative | 1021526 - 1022629 | 41839.0 |
| mboat family protein | DXA34_04825 | Not Available | Negative | 1022648 - 1024060 | 53434.3 |
| sensor histidine kinase | DXA34_04830 | Not Available | Negative | 1024112 - 1026466 | 88799.4 |
| dna-binding response regulator | DXA34_04835 | Not Available | Negative | 1026491 - 1027186 | 26038.7 |
| trap transporter substrate-binding protein | DXA34_04845 | Not Available | Negative | 1028007 - 1029086 | 38377.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
