Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine ammonia-lyase | DXA34_04745 | Not Available | Negative | 1002080 - 1003600 | 54527.1 |
| diguanylate cyclase | DXA34_04750 | Not Available | Positive | 1003860 - 1004810 | 35934.9 |
| atp-binding protein | DXA34_04755 | Not Available | Positive | 1004961 - 1007867 | 113111.0 |
| hypothetical protein | DXA34_04760 | Not Available | Positive | 1008081 - 1008623 | 21143.0 |
| hypothetical protein | DXA34_04765 | Not Available | Positive | 1009148 - 1009591 | 16735.5 |
| glutamate formimidoyltransferase | DXA34_04770 | Not Available | Negative | 1009714 - 1010592 | 32297.9 |
| formiminotransferase-cyclodeaminase | DXA34_04775 | Not Available | Negative | 1010669 - 1011235 | 20410.4 |
| imidazolonepropionase | DXA34_04780 | Not Available | Negative | 1011226 - 1012494 | 45687.2 |
| urocanate hydratase | DXA34_04785 | Not Available | Negative | 1012581 - 1014338 | 64978.6 |
| amidohydrolase | DXA34_04790 | Not Available | Positive | 1014954 - 1016144 | 42984.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
