Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4132 domain-containing protein | DXA34_04695 | Not Available | Positive | 986516 - 991741 | 199288.0 |
| threonine dehydrogenase | DXA34_04700 | Not Available | Positive | 992071 - 993108 | 37203.5 |
| fructose-bisphosphate aldolase | DXA34_04705 | Not Available | Positive | 993167 - 994009 | 30599.4 |
| sugar kinase | DXA34_04710 | Not Available | Positive | 994045 - 995583 | 55603.5 |
| abc transporter substrate-binding protein | DXA34_04715 | Not Available | Positive | 995599 - 996657 | 38361.2 |
| trap transporter small permease | DXA34_04720 | Not Available | Positive | 996690 - 997220 | 19773.7 |
| trap transporter large permease | DXA34_04725 | Not Available | Positive | 997217 - 998515 | 45523.1 |
| d-2-hydroxyacid dehydrogenase | DXA34_04730 | Not Available | Positive | 998695 - 999654 | 34523.6 |
| murr/rpir family transcriptional regulator | DXA34_04735 | Not Available | Positive | 999912 - 1000760 | 31031.5 |
| glycerate kinase | DXA34_04740 | Not Available | Positive | 1000782 - 1001921 | 39680.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
