Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prd domain-containing protein | DXA34_00025 | Not Available | Negative | 4478 - 6577 | 81162.2 |
| pts mannitol transporter subunit iicba | DXA34_00030 | Not Available | Negative | 6759 - 8144 | 48389.4 |
| d-alanyl-d-alanine carboxypeptidase | DXA34_00035 | Not Available | Negative | 8385 - 9599 | 43865.9 |
| polysaccharide deacetylase | DXA34_00040 | Not Available | Positive | 9902 - 11398 | 56045.5 |
| yitt family protein | DXA34_00045 | Not Available | Positive | 11586 - 12515 | 33338.0 |
| gtpase | DXA34_00050 | Not Available | Negative | 12649 - 13584 | 36256.3 |
| cobalamin biosynthesis protein cobw | DXA34_00055 | Not Available | Negative | 13645 - 14865 | 45168.6 |
| metal abc transporter permease | DXA34_00060 | Not Available | Negative | 15018 - 15842 | 29096.9 |
| metal abc transporter atp-binding protein | DXA34_00065 | Not Available | Negative | 15839 - 16549 | 25902.4 |
| zinc abc transporter substrate-binding protein | DXA34_00070 | Not Available | Negative | 16550 - 17614 | 39538.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
