Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DXA34_04485 | Not Available | Negative | 934114 - 937212 | 115206.0 |
| sensor histidine kinase | DXA34_04495 | Not Available | Negative | 938833 - 940236 | 52243.8 |
| lysr family transcriptional regulator | DXA34_04500 | Not Available | Negative | 940254 - 941120 | 32835.7 |
| electron transfer flavoprotein subunit beta | DXA34_04505 | Not Available | Positive | 941363 - 942280 | 32480.2 |
| dna polymerase iii | DXA34_04510 | Not Available | Positive | 942498 - 943505 | 39493.5 |
| tetr/acrr family transcriptional regulator | DXA34_04515 | Not Available | Negative | 943590 - 944162 | 21856.4 |
| flavodoxin | DXA34_04520 | Not Available | Positive | 944257 - 945042 | 28996.2 |
| d-alanyl-d-alanine carboxypeptidase | DXA34_04525 | Not Available | Negative | 945072 - 946661 | 57007.6 |
| tigr01906 family membrane protein | DXA34_04530 | Not Available | Negative | 946929 - 947621 | 26351.8 |
| had family phosphatase | DXA34_04535 | Not Available | Positive | 947888 - 948589 | 26774.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
