Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporulation transcription factor spo0a | DXA34_04275 | Not Available | Negative | 893904 - 894710 | 30350.8 |
| spoivb peptidase | DXA34_04280 | Not Available | Negative | 895591 - 896868 | 46423.5 |
| hypothetical protein | DXA34_04285 | Not Available | Positive | 897114 - 897308 | 7147.85 |
| pyridoxamine 5'-phosphate oxidase family protein | DXA34_04290 | Not Available | Positive | 897371 - 897859 | 19037.6 |
| hybrid sensor histidine kinase/response regulator | DXA34_04295 | Not Available | Negative | 897930 - 900494 | 96244.8 |
| hpt domain-containing protein | DXA34_04300 | Not Available | Negative | 900494 - 900856 | 14001.7 |
| diguanylate cyclase | DXA34_04305 | Not Available | Negative | 900875 - 902527 | 62936.1 |
| gntr family transcriptional regulator | DXA34_04310 | Not Available | Positive | 902691 - 904172 | 56051.6 |
| sodium ion-translocating decarboxylase subunit beta | DXA34_04315 | Not Available | Negative | 904453 - 905589 | 40290.9 |
| asp23/gls24 family envelope stress response protein | DXA34_04320 | Not Available | Negative | 906201 - 906578 | 13505.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
