Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_04115 | Not Available | Negative | 854834 - 855502 | 22556.9 |
| hypothetical protein | DXA34_04120 | Not Available | Negative | 855698 - 856204 | 17936.3 |
| hypothetical protein | DXA34_04125 | Not Available | Negative | 856260 - 863519 | 257148.0 |
| hypothetical protein | DXA34_04130 | Not Available | Negative | 863550 - 863729 | 6911.39 |
| xre family transcriptional regulator | DXA34_04135 | Not Available | Positive | 864065 - 864574 | 19144.8 |
| cation-translocating p-type atpase | DXA34_04140 | Not Available | Negative | 864704 - 867352 | 95574.5 |
| cytidylate kinase-like family protein | DXA34_04145 | Not Available | Negative | 868142 - 868786 | 24803.8 |
| dna alkylation repair protein | DXA34_04150 | Not Available | Negative | 868870 - 869565 | 26853.5 |
| galactokinase | DXA34_04155 | Not Available | Negative | 869574 - 870863 | 46959.7 |
| tigr01212 family radical sam protein | DXA34_04160 | Not Available | Positive | 871123 - 872079 | 35591.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
