Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Reverse transcriptase | DXA34_03050 | Not Available | Positive | 616316 - 617512 | 47925.1 |
| Hypothetical protein | DXA34_03055 | Not Available | Positive | 617530 - 617853 | 12586.2 |
| Holin | DXA34_03060 | Not Available | Positive | 617865 - 618161 | 10616.5 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 221 - 3111 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 476 - 593 | Not Available |
| methyl-accepting chemotaxis protein | DXA34_00005 | Not Available | Negative | 66 - 1742 | 60373.4 |
| duf378 domain-containing protein | DXA34_00010 | Not Available | Positive | 1969 - 2172 | 7278.19 |
| l-sorbose 1-phosphate reductase | DXA34_00015 | Not Available | Negative | 2366 - 3628 | 46536.7 |
| pts sugar transporter subunit iia | DXA34_00020 | Not Available | Negative | 3689 - 4162 | 17134.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 4942 - 5121 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
