Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trkh family potassium uptake protein | DXA34_04015 | Not Available | Negative | 834794 - 836287 | 54179.2 |
| trka family potassium uptake protein | DXA34_04020 | Not Available | Negative | 836287 - 836955 | 24095.8 |
| trka family potassium uptake protein | DXA34_04025 | Not Available | Negative | 836988 - 837407 | 15337.4 |
| pas domain s-box protein | DXA34_04030 | Not Available | Negative | 837753 - 841691 | 148590.0 |
| hpt domain-containing protein | DXA34_04035 | Not Available | Negative | 841693 - 842055 | 13778.4 |
| hypothetical protein | DXA34_04040 | Not Available | Negative | 842083 - 842313 | 8416.64 |
| nad(p)-dependent oxidoreductase | DXA34_04045 | Not Available | Negative | 842360 - 843238 | 31294.8 |
| rraa family protein | DXA34_04050 | Not Available | Negative | 843253 - 843954 | 25297.7 |
| lysr family transcriptional regulator | DXA34_04055 | Not Available | Positive | 844246 - 845214 | 37113.3 |
| putative basic amino acid antiporter yfcc | DXA34_04060 | Not Available | Negative | 845282 - 846745 | 52316.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
