Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase arad | DXA34_03965 | Not Available | Negative | 819171 - 819878 | 26157.1 |
| ribulokinase | DXA34_03970 | Not Available | Negative | 820032 - 821738 | 61861.2 |
| abc transporter permease | DXA34_03975 | Not Available | Negative | 821752 - 822717 | 33455.3 |
| sugar abc transporter atp-binding protein | DXA34_03980 | Not Available | Negative | 822736 - 824220 | 54850.2 |
| sugar abc transporter substrate-binding protein | DXA34_03985 | Not Available | Negative | 824331 - 825383 | 37235.8 |
| murr/rpir family transcriptional regulator | DXA34_03990 | Not Available | Negative | 825431 - 826270 | 30982.7 |
| penicillin-binding protein | DXA34_03995 | Not Available | Negative | 826582 - 829437 | 104727.0 |
| gtp-binding protein | DXA34_04000 | Not Available | Negative | 829866 - 832562 | 100590.0 |
| atp-binding cassette domain-containing protein | DXA34_04005 | Not Available | Negative | 832718 - 833065 | 12867.3 |
| duf4118 domain-containing protein | DXA34_04010 | Not Available | Negative | 833293 - 834789 | 56697.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
