Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DXA34_03915 | Not Available | Positive | 809640 - 810434 | 29322.5 |
| sodium:solute symporter family protein | DXA34_03920 | Not Available | Negative | 810536 - 812011 | 52686.5 |
| hypothetical protein | DXA34_03925 | Not Available | Positive | 812326 - 812523 | 7265.69 |
| yfcc family protein | DXA34_03930 | Not Available | Negative | 812541 - 813953 | 50652.6 |
| acetyl-coa hydrolase | DXA34_03935 | Not Available | Negative | 814014 - 815312 | 48203.0 |
| hypothetical protein | DXA34_03940 | Not Available | Negative | 815343 - 816131 | 28929.8 |
| lysr family transcriptional regulator | DXA34_03945 | Not Available | Positive | 816380 - 817318 | 35731.3 |
| sis domain-containing protein | DXA34_03950 | Not Available | Negative | 817331 - 817897 | 20926.8 |
| ribulose-phosphate 3-epimerase | DXA34_03955 | Not Available | Negative | 817827 - 818564 | 26671.3 |
| sis domain-containing protein | DXA34_03960 | Not Available | Negative | 818561 - 819151 | 21326.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
