Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DXA34_03815 | Not Available | Negative | 786965 - 787762 | 28616.7 |
| abc transporter permease | DXA34_03820 | Not Available | Negative | 787784 - 788728 | 34529.2 |
| abc transporter substrate-binding protein | DXA34_03825 | Not Available | Negative | 788793 - 790367 | 57225.0 |
| hypothetical protein | DXA34_03830 | Not Available | Negative | 790405 - 790752 | 12595.6 |
| glycerophosphodiester phosphodiesterase | DXA34_03835 | Not Available | Negative | 790780 - 791625 | 32977.0 |
| phosphoesterase | DXA34_03840 | Not Available | Negative | 791785 - 792324 | 20611.5 |
| smc family atpase | DXA34_03845 | Not Available | Negative | 792390 - 795599 | 122041.0 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DXA34_03850 | Not Available | Negative | 796287 - 797597 | 49476.6 |
| hpr family phosphocarrier protein | DXA34_03855 | Not Available | Positive | 797736 - 797966 | 8529.43 |
| trna 4-thiouridine(8) synthase thii | DXA34_03860 | Not Available | Negative | 798058 - 799236 | 44164.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
