Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase | DXA34_03765 | Not Available | Positive | 774228 - 775241 | 36497.0 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | DXA34_03770 | Not Available | Positive | 775345 - 776481 | 41586.8 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DXA34_03775 | Not Available | Positive | 776521 - 777801 | 45655.6 |
| ggdef domain-containing protein | DXA34_03780 | Not Available | Negative | 777832 - 780309 | 93065.3 |
| cysteine hydrolase | DXA34_03785 | Not Available | Negative | 780362 - 780895 | 19689.8 |
| abc transporter substrate-binding protein | DXA34_03790 | Not Available | Positive | 781444 - 782544 | 38076.9 |
| abc transporter permease | DXA34_03795 | Not Available | Positive | 782659 - 783534 | 30800.9 |
| atp-binding cassette domain-containing protein | DXA34_03800 | Not Available | Positive | 783535 - 784308 | 28933.4 |
| nad-dependent deacetylase | DXA34_03805 | Not Available | Negative | 784414 - 785145 | 27907.5 |
| abc transporter atp-binding protein | DXA34_03810 | Not Available | Negative | 785236 - 786954 | 63619.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
