Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase acyl carrier protein | DXA34_03335 | Not Available | Positive | 685139 - 685438 | 10870.4 |
| citrate lyase subunit beta | DXA34_03340 | Not Available | Positive | 685435 - 686325 | 32459.1 |
| yfcc family protein | DXA34_03345 | Not Available | Negative | 686419 - 687819 | 49777.3 |
| m20 family peptidase | DXA34_03350 | Not Available | Negative | 687849 - 689030 | 43133.6 |
| cvpa family protein | DXA34_03355 | Not Available | Positive | 689439 - 691133 | 64007.8 |
| nucleoid-associated protein | DXA34_03360 | Not Available | Positive | 691450 - 692460 | 38072.3 |
| lyttr family transcriptional regulator | DXA34_03365 | Not Available | Positive | 692577 - 693017 | 17081.9 |
| duf3021 domain-containing protein | DXA34_03370 | Not Available | Positive | 693028 - 693501 | 17782.0 |
| eama family transporter | DXA34_03375 | Not Available | Negative | 693529 - 694449 | 33246.6 |
| hypothetical protein | DXA34_03380 | Not Available | Negative | 694481 - 695293 | 32008.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
