Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein | DXA34_03225 | Not Available | Positive | 655318 - 657714 | 85878.7 |
| 30s ribosomal protein s15 | DXA34_03235 | Not Available | Positive | 659652 - 659918 | 10055.4 |
| polyribonucleotide nucleotidyltransferase | DXA34_03240 | Not Available | Positive | 660122 - 662245 | 77606.6 |
| heme abc exporter atp-binding protein ccma | DXA34_03245 | Not Available | Positive | 662425 - 663096 | 24085.3 |
| zinc ribbon domain-containing protein | DXA34_03250 | Not Available | Positive | 663216 - 665087 | 67903.3 |
| abc transporter permease | DXA34_03255 | Not Available | Positive | 665106 - 666299 | 42874.5 |
| hypothetical protein | DXA34_03260 | Not Available | Positive | 666292 - 667359 | 39874.7 |
| magnesium transporter | DXA34_03265 | Not Available | Positive | 667976 - 669346 | 51412.7 |
| hypothetical protein | DXA34_03270 | Not Available | Positive | 669721 - 669909 | 6574.56 |
| glutamate--trna ligase | DXA34_03275 | Not Available | Positive | 669989 - 671443 | 55233.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
