Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjih family protein | DXA34_03075 | Not Available | Positive | 619634 - 620974 | 49135.4 |
| alpha/beta hydrolase | DXA34_03080 | Not Available | Positive | 621066 - 622031 | 35602.6 |
| hypothetical protein | DXA34_03085 | Not Available | Negative | 622251 - 622940 | 25840.3 |
| hypothetical protein | DXA34_03090 | Not Available | Positive | 623146 - 623946 | 31182.1 |
| gntr family transcriptional regulator | DXA34_03095 | Not Available | Negative | 624066 - 624746 | 26230.4 |
| sodium:solute symporter family protein | DXA34_03100 | Not Available | Positive | 625083 - 626456 | 48793.2 |
| gamma-glutamyltransferase | DXA34_03105 | Not Available | Positive | 626458 - 628182 | 62025.7 |
| cold-shock protein | DXA34_03110 | Not Available | Negative | 628325 - 628528 | 7335.48 |
| dicarboxylate/amino acid:cation symporter | DXA34_03115 | Not Available | Positive | 629033 - 630268 | 43404.8 |
| dna topoisomerase iii | DXA34_03120 | Not Available | Positive | 630464 - 632671 | 83530.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
