Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic ribonucleoside-triphosphate reductase activating protein | DXA34_02555 | Not Available | Negative | 537313 - 538005 | 25621.9 |
| nucleoside deaminase | DXA34_02560 | Not Available | Positive | 538166 - 538633 | 17208.3 |
| branched-chain amino acid aminotransferase | DXA34_02565 | Not Available | Negative | 538715 - 539740 | 37585.0 |
| hypothetical protein | DXA34_02570 | Not Available | Positive | 539893 - 540102 | 7985.68 |
| 6-phosphofructokinase | DXA34_02580 | Not Available | Positive | 540886 - 541965 | 38940.2 |
| dna polymerase iii subunit gamma/tau | DXA34_02585 | Not Available | Positive | 541995 - 543605 | 59819.6 |
| ybab/ebfc family nucleoid-associated protein | DXA34_02590 | Not Available | Positive | 543664 - 544017 | 12340.8 |
| recombination protein recr | DXA34_02595 | Not Available | Positive | 544021 - 544620 | 22121.8 |
| hypothetical protein | DXA34_02600 | Not Available | Positive | 544668 - 546959 | 88373.5 |
| cvpa family protein | DXA34_02605 | Not Available | Positive | 547069 - 547773 | 25677.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
