Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mazg family protein | DXA34_02445 | Not Available | Positive | 515232 - 515714 | 18397.5 |
| hu family dna-binding protein | DXA34_02450 | Not Available | Positive | 515800 - 516075 | 9765.84 |
| rna-binding s4 domain-containing protein | DXA34_02455 | Not Available | Positive | 516080 - 516319 | 8953.04 |
| sporulation protein yabp | DXA34_02460 | Not Available | Positive | 516389 - 516673 | 10582.5 |
| spore coat protein | DXA34_02465 | Not Available | Positive | 516698 - 517333 | 25680.7 |
| septum formation initiator | DXA34_02470 | Not Available | Positive | 517284 - 517607 | 12478.4 |
| serine/threonine protein phosphatase | DXA34_02475 | Not Available | Positive | 517802 - 519214 | 52284.8 |
| trna lysidine(34) synthetase tils | DXA34_02480 | Not Available | Positive | 519376 - 520803 | 53267.6 |
| hypoxanthine phosphoribosyltransferase | DXA34_02485 | Not Available | Positive | 520793 - 521317 | 19788.1 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | DXA34_02490 | Not Available | Positive | 521360 - 523138 | 64569.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
