Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_02395 | Not Available | Positive | 504808 - 506226 | 52745.2 |
| trap transporter substrate-binding protein | DXA34_02400 | Not Available | Positive | 506274 - 507344 | 38503.7 |
| trap transporter small permease | DXA34_02405 | Not Available | Positive | 507427 - 508017 | 21599.2 |
| trap transporter large permease | DXA34_02410 | Not Available | Positive | 508014 - 509291 | 44724.9 |
| myo-inositol catabolism protein | DXA34_02415 | Not Available | Positive | 509353 - 510168 | 30139.4 |
| phosphoglycerate dehydrogenase | DXA34_02420 | Not Available | Positive | 510179 - 511138 | 34579.3 |
| sdr family oxidoreductase | DXA34_02425 | Not Available | Positive | 511176 - 511946 | 27606.0 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DXA34_02430 | Not Available | Positive | 512032 - 512658 | 22439.4 |
| hit family protein | DXA34_02435 | Not Available | Positive | 512668 - 513081 | 15525.7 |
| nadp-dependent phosphogluconate dehydrogenase | DXA34_02440 | Not Available | Positive | 513153 - 514553 | 51442.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
