Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--l-alanine ligase | DXA34_02240 | Not Available | Positive | 468754 - 470133 | 50731.5 |
| dnad domain protein | DXA34_02245 | Not Available | Positive | 470450 - 471511 | 40091.1 |
| dna replication protein dnac | DXA34_02250 | Not Available | Positive | 471582 - 472586 | 39345.8 |
| ribose-phosphate pyrophosphokinase | DXA34_02255 | Not Available | Positive | 472761 - 473942 | 44379.7 |
| alcohol dehydrogenase | DXA34_02260 | Not Available | Positive | 474055 - 475137 | 38944.9 |
| hydroxyacid dehydrogenase | DXA34_02265 | Not Available | Negative | 475217 - 476299 | 40254.9 |
| sodium/proline symporter | DXA34_02270 | Not Available | Negative | 476315 - 477790 | 52529.4 |
| n-acyl homoserine lactonase family protein | DXA34_02275 | Not Available | Negative | 477934 - 478686 | 27725.2 |
| arac family transcriptional regulator | DXA34_02280 | Not Available | Positive | 479313 - 480191 | 33519.1 |
| xre family transcriptional regulator | DXA34_02285 | Not Available | Negative | 480531 - 480911 | 14266.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
