Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase family protein | DXA34_02190 | Not Available | Positive | 457209 - 458153 | 33814.9 |
| hypothetical protein | DXA34_02195 | Not Available | Positive | 458379 - 459059 | 24538.9 |
| thiamine pyrophosphate-binding protein | DXA34_02200 | Not Available | Positive | 459130 - 460971 | 66379.6 |
| sugar phosphate isomerase/epimerase | DXA34_02205 | Not Available | Positive | 461062 - 461883 | 30002.2 |
| fructose-6-phosphate aldolase | DXA34_02210 | Not Available | Positive | 461896 - 462552 | 23667.6 |
| transketolase | DXA34_02215 | Not Available | Positive | 462708 - 463610 | 32783.9 |
| transketolase family protein | DXA34_02220 | Not Available | Positive | 463600 - 464553 | 33713.4 |
| aldehyde dehydrogenase family protein | DXA34_02225 | Not Available | Positive | 464834 - 466270 | 52046.6 |
| type i 3-dehydroquinate dehydratase | DXA34_02230 | Not Available | Negative | 466628 - 467380 | 27259.8 |
| quet transporter family protein | DXA34_02235 | Not Available | Positive | 467879 - 468394 | 17985.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
