Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | DXA34_02135 | Not Available | Positive | 446435 - 446989 | 20781.2 |
| trap transporter large permease | DXA34_02140 | Not Available | Positive | 446989 - 448287 | 45574.8 |
| sialic acid-binding protein | DXA34_02145 | Not Available | Positive | 448439 - 449569 | 39996.6 |
| eama family transporter | DXA34_02150 | Not Available | Positive | 449728 - 450639 | 32660.2 |
| lysr family transcriptional regulator | DXA34_02155 | Not Available | Positive | 450721 - 451632 | 34654.7 |
| thiamine pyrophosphate-binding protein | DXA34_02160 | Not Available | Positive | 451762 - 453597 | 66439.7 |
| lysr family transcriptional regulator | DXA34_02170 | Not Available | Negative | 454492 - 455373 | 32327.0 |
| tetr/acrr family transcriptional regulator | DXA34_02175 | Not Available | Negative | 455373 - 455909 | 21116.9 |
| hypothetical protein | DXA34_02180 | Not Available | Positive | 456079 - 456345 | 9933.47 |
| transketolase | DXA34_02185 | Not Available | Positive | 456361 - 457209 | 31252.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
