Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1576 domain-containing protein | DXA34_02085 | Not Available | Positive | 432688 - 433968 | 45307.8 |
| hypothetical protein | DXA34_02090 | Not Available | Negative | 434077 - 434571 | 17570.8 |
| eal domain-containing protein | DXA34_02095 | Not Available | Positive | 434773 - 437715 | 111344.0 |
| potassium/proton antiporter | DXA34_02100 | Not Available | Positive | 437798 - 439426 | 59343.8 |
| arac family transcriptional regulator | DXA34_02105 | Not Available | Positive | 439535 - 440386 | 31836.0 |
| nadp-specific glutamate dehydrogenase | DXA34_02110 | Not Available | Negative | 440480 - 441814 | 48461.1 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | DXA34_02115 | Not Available | Positive | 442247 - 443104 | 30865.3 |
| hydroxymethylglutaryl-coa lyase | DXA34_02120 | Not Available | Negative | 443428 - 444351 | 33474.3 |
| sugar phosphate isomerase/epimerase | DXA34_02125 | Not Available | Positive | 444706 - 445512 | 29738.8 |
| shikimate dehydrogenase | DXA34_02130 | Not Available | Positive | 445537 - 446400 | 31268.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
