Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DXA34_02030 | Not Available | Negative | 421175 - 422149 | 36586.6 |
| hypothetical protein | DXA34_02035 | Not Available | Positive | 422247 - 423302 | 39373.1 |
| hypothetical protein | DXA34_02040 | Not Available | Positive | 423342 - 424535 | 43335.4 |
| iron-containing alcohol dehydrogenase | DXA34_02045 | Not Available | Positive | 424532 - 425647 | 41135.1 |
| flavin reductase family protein | DXA34_02050 | Not Available | Positive | 425788 - 426438 | 24194.2 |
| shikimate kinase | DXA34_02055 | Not Available | Positive | 426428 - 426967 | 19931.2 |
| nitrite reductase | DXA34_02065 | Not Available | Positive | 427119 - 428483 | 49759.2 |
| cysteine synthase a | DXA34_02070 | Not Available | Positive | 428505 - 429434 | 32648.1 |
| serine dehydratase subunit alpha family protein | DXA34_02075 | Not Available | Positive | 429456 - 430730 | 45282.6 |
| hlyc/corc family transporter | DXA34_02080 | Not Available | Positive | 431165 - 432511 | 50386.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
