Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f420-0--gamma-glutamyl ligase | DXA34_01980 | Not Available | Positive | 403168 - 404367 | 43942.2 |
| hypothetical protein | DXA34_01985 | Not Available | Positive | 404397 - 405497 | 42534.3 |
| spore protease yyac | DXA34_01990 | Not Available | Positive | 405579 - 406178 | 22435.2 |
| peptidoglycan-binding protein | DXA34_01995 | Not Available | Positive | 406244 - 407731 | 53748.9 |
| hypothetical protein | DXA34_02000 | Not Available | Positive | 407851 - 409131 | 48193.3 |
| transketolase | DXA34_02005 | Not Available | Positive | 409151 - 411142 | 71859.1 |
| rok family protein | DXA34_02010 | Not Available | Positive | 411197 - 412141 | 33495.7 |
| amidohydrolase | DXA34_02015 | Not Available | Positive | 412295 - 413920 | 59059.1 |
| duf1533 domain-containing protein | DXA34_02020 | Not Available | Positive | 414302 - 418963 | 167908.0 |
| putative manganese-dependent inorganic diphosphatase | DXA34_02025 | Not Available | Positive | 419351 - 421018 | 61433.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
