Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence-associated protein e | DXA34_23715 | Not Available | Negative | 5052752 - 5053423 | 26182.0 |
| is110 family transposase | DXA34_23720 | Not Available | Negative | 5053542 - 5054756 | 45761.8 |
| is256 family transposase | DXA34_23725 | Not Available | Negative | 5055201 - 5056442 | 47769.0 |
| is256 family transposase | DXA34_23730 | Not Available | Positive | 5056611 - 5057852 | 47779.0 |
| hypothetical protein | DXA34_23735 | Not Available | Negative | 5058089 - 5059414 | 49834.9 |
| conjugal transfer protein trag | DXA34_23740 | Not Available | Positive | 5059492 - 5060436 | 35169.2 |
| phosphopeptide-binding protein | DXA34_23745 | Not Available | Positive | 5060458 - 5060613 | 5419.64 |
| hypothetical protein | DXA34_23750 | Not Available | Positive | 5060649 - 5060807 | 5484.75 |
| hypothetical protein | DXA34_23755 | Not Available | Positive | 5060840 - 5060926 | 3423.29 |
| peptidoglycan endopeptidase | DXA34_23765 | Not Available | Negative | 5061081 - 5061794 | 25158.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
