Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgcq protein | DXA34_23590 | Not Available | Negative | 5030502 - 5031338 | 30242.5 |
| group ii intron reverse transcriptase/maturase | DXA34_23595 | Not Available | Negative | 5031525 - 5033315 | 69711.8 |
| hypothetical protein | DXA34_23600 | Not Available | Negative | 5033555 - 5033764 | 7980.97 |
| hypothetical protein | DXA34_23610 | Not Available | Negative | 5034865 - 5035443 | 21713.9 |
| marr family transcriptional regulator | DXA34_23615 | Not Available | Positive | 5035666 - 5036151 | 18805.3 |
| nadh peroxidase | DXA34_23620 | Not Available | Negative | 5036389 - 5036934 | 20079.8 |
| transcriptional repressor | DXA34_23625 | Not Available | Negative | 5037086 - 5037481 | 14687.4 |
| tigr00266 family protein | DXA34_23630 | Not Available | Negative | 5037641 - 5038321 | 24064.2 |
| group ii intron reverse transcriptase/maturase | DXA34_23635 | Not Available | Negative | 5038577 - 5039860 | 49290.2 |
| abc transporter permease | DXA34_23640 | Not Available | Negative | 5040573 - 5041388 | 31570.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
