Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpr family phosphocarrier protein | DXA34_23425 | Not Available | Negative | 4997854 - 4998105 | 9534.55 |
| mate family efflux transporter | DXA34_23435 | Not Available | Negative | 4999750 - 5001075 | 47501.9 |
| isoprenylcysteine carboxylmethyltransferase family protein | DXA34_23440 | Not Available | Negative | 5001155 - 5001769 | 23892.4 |
| tetr/acrr family transcriptional regulator | DXA34_23445 | Not Available | Negative | 5001849 - 5002409 | 21340.7 |
| class i sam-dependent methyltransferase | DXA34_23450 | Not Available | Negative | 5002475 - 5003083 | 22654.3 |
| hypothetical protein | DXA34_23455 | Not Available | Positive | 5003326 - 5003544 | 8525.17 |
| helix-turn-helix domain-containing protein | DXA34_23460 | Not Available | Positive | 5003673 - 5004617 | 35945.6 |
| pcfb family protein | DXA34_23465 | Not Available | Positive | 5004654 - 5005127 | 17658.5 |
| type iv secretory system conjugative dna transfer family protein | DXA34_23470 | Not Available | Positive | 5005124 - 5006908 | 67303.8 |
| hypothetical protein | DXA34_23475 | Not Available | Positive | 5006972 - 5007112 | 4759.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
