Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | DXA34_23365 | Not Available | Positive | 4985055 - 4986461 | 52373.9 |
| hypothetical protein | DXA34_23370 | Not Available | Positive | 4986687 - 4987538 | 30910.3 |
| radical sam protein | DXA34_23375 | Not Available | Positive | 4987609 - 4988451 | 32848.1 |
| prgi family protein | DXA34_23380 | Not Available | Positive | 4988453 - 4988845 | 14836.7 |
| conjugal transfer protein trae | DXA34_23385 | Not Available | Positive | 4988805 - 4990973 | 81898.5 |
| hypothetical protein | DXA34_23395 | Not Available | Positive | 4991128 - 4992000 | 31451.7 |
| adenine methyltransferase | DXA34_23400 | Not Available | Positive | 4992014 - 4992598 | 22087.5 |
| duf87 domain-containing protein | DXA34_23410 | Not Available | Positive | 4992960 - 4995158 | 82736.9 |
| dicarboxylate/amino acid:cation symporter | DXA34_23415 | Not Available | Negative | 4995314 - 4996618 | 46571.7 |
| carbon-nitrogen hydrolase family protein | DXA34_23420 | Not Available | Negative | 4996872 - 4997687 | 30005.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
