Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_23310 | Not Available | Negative | 4975045 - 4975233 | 7516.17 |
| hypothetical protein | DXA34_23315 | Not Available | Negative | 4975536 - 4975718 | 7156.88 |
| xre family transcriptional regulator | DXA34_23320 | Not Available | Positive | 4975717 - 4976523 | 31015.2 |
| hypothetical protein | DXA34_23325 | Not Available | Negative | 4976621 - 4977187 | 21207.3 |
| tnpv protein | DXA34_23330 | Not Available | Negative | 4977200 - 4977577 | 14843.8 |
| xre family transcriptional regulator | DXA34_23335 | Not Available | Negative | 4977537 - 4977809 | 10280.4 |
| dna-binding response regulator | DXA34_23345 | Not Available | Positive | 4978357 - 4979082 | 28576.5 |
| hypothetical protein | DXA34_23350 | Not Available | Positive | 4979235 - 4982174 | 107070.0 |
| peptidase s8 | DXA34_23355 | Not Available | Negative | 4982372 - 4983262 | 31873.2 |
| polysaccharide deacetylase | DXA34_23360 | Not Available | Negative | 4983607 - 4984572 | 35021.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
