Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_23260 | Not Available | Negative | 4964599 - 4964788 | 7644.14 |
| hypothetical protein | DXA34_23265 | Not Available | Positive | 4964864 - 4965712 | 33028.1 |
| pyruvate kinase | DXA34_23270 | Not Available | Positive | 4965770 - 4967206 | 52731.7 |
| diaminopimelate decarboxylase | DXA34_23275 | Not Available | Positive | 4967535 - 4968800 | 47301.9 |
| cys-trna(pro) deacylase | DXA34_23280 | Not Available | Positive | 4969555 - 4970022 | 17101.9 |
| cell wall hydrolase | DXA34_23285 | Not Available | Positive | 4970453 - 4971301 | 31627.5 |
| phosphoenolpyruvate carboxykinase (atp) | DXA34_23290 | Not Available | Positive | 4971639 - 4973336 | 62782.6 |
| hypothetical protein | DXA34_23295 | Not Available | Negative | 4973665 - 4974114 | 17219.0 |
| duf3847 domain-containing protein | DXA34_23300 | Not Available | Negative | 4974418 - 4974714 | 11748.4 |
| deor family transcriptional regulator | DXA34_23305 | Not Available | Negative | 4974707 - 4975048 | 12372.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
