Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DXA34_23140 | Not Available | Negative | 4938559 - 4939647 | 40188.4 |
| tyrosine protein kinase | DXA34_23145 | Not Available | Negative | 4939888 - 4940589 | 26279.6 |
| hypothetical protein | DXA34_23155 | Not Available | Negative | 4941502 - 4942236 | 27768.9 |
| integrase | DXA34_23160 | Not Available | Negative | 4942730 - 4943581 | 33133.6 |
| gfo/idh/moca family oxidoreductase | DXA34_23165 | Not Available | Negative | 4944137 - 4945321 | 43234.7 |
| lysr family transcriptional regulator | DXA34_23170 | Not Available | Positive | 4945643 - 4946587 | 35480.0 |
| rna-directed dna polymerase | DXA34_23175 | Not Available | Negative | 4946646 - 4947632 | 37871.0 |
| sodium:proton antiporter | DXA34_23180 | Not Available | Negative | 4947930 - 4949252 | 46464.0 |
| hypothetical protein | DXA34_23185 | Not Available | Positive | 4949754 - 4950245 | 17647.8 |
| acyltransferase | DXA34_23190 | Not Available | Negative | 4950371 - 4952032 | 62248.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
