Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinylglutamate desuccinylase | DXA34_22780 | Not Available | Negative | 4872422 - 4873360 | 34369.1 |
| hypothetical protein | DXA34_22785 | Not Available | Negative | 4873593 - 4873787 | 7426.38 |
| hypothetical protein | DXA34_22790 | Not Available | Negative | 4873823 - 4874533 | 27268.0 |
| glycerol-3-phosphate cytidylyltransferase | DXA34_22795 | Not Available | Negative | 4874530 - 4875897 | 52175.1 |
| alanine--glyoxylate aminotransferase family protein | DXA34_22800 | Not Available | Negative | 4875931 - 4876995 | 38702.1 |
| nad(p)-dependent oxidoreductase | DXA34_22805 | Not Available | Negative | 4876988 - 4878046 | 39717.5 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DXA34_22810 | Not Available | Negative | 4878063 - 4878773 | 26518.4 |
| o-antigen polysaccharide polymerase wzy | DXA34_22815 | Not Available | Negative | 4878776 - 4880239 | 56153.3 |
| hypothetical protein | DXA34_22820 | Not Available | Negative | 4880243 - 4881414 | 44553.4 |
| hypothetical protein | DXA34_22830 | Not Available | Positive | 4882066 - 4882893 | 30448.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
