Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching protein glgb | DXA34_22630 | Not Available | Negative | 4836988 - 4839465 | 93776.5 |
| hypothetical protein | DXA34_22635 | Not Available | Positive | 4839619 - 4839801 | 6522.06 |
| duf4392 domain-containing protein | DXA34_22640 | Not Available | Positive | 4840283 - 4841272 | 35010.1 |
| 4-hydroxybutyrate--acetyl-coa coa transferase | DXA34_22645 | Not Available | Negative | 4841415 - 4842749 | 48839.9 |
| mfs transporter | DXA34_22650 | Not Available | Negative | 4842806 - 4844035 | 44818.4 |
| blai/meci/copy family transcriptional regulator | DXA34_22655 | Not Available | Negative | 4844744 - 4845121 | 14890.9 |
| lysr family transcriptional regulator | DXA34_22660 | Not Available | Negative | 4845333 - 4846208 | 33626.7 |
| duf3870 domain-containing protein | DXA34_22665 | Not Available | Positive | 4846432 - 4846752 | 12133.8 |
| sodium:alanine symporter family protein | DXA34_22670 | Not Available | Negative | 4846997 - 4848352 | 47670.4 |
| sodium:proton antiporter | DXA34_22675 | Not Available | Positive | 4849274 - 4850602 | 47073.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
