Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DXA34_01810 | Not Available | Positive | 362689 - 363567 | 33629.8 |
| hypothetical protein | DXA34_01815 | Not Available | Positive | 363788 - 364837 | 36714.2 |
| trap transporter permease | DXA34_01820 | Not Available | Positive | 364870 - 366819 | 69248.7 |
| proline--trna ligase | DXA34_01825 | Not Available | Positive | 367312 - 368745 | 54458.3 |
| cca trna nucleotidyltransferase | DXA34_01830 | Not Available | Positive | 368976 - 370202 | 45793.0 |
| mate family efflux transporter | DXA34_01835 | Not Available | Positive | 370223 - 371584 | 49133.6 |
| duf1667 domain-containing protein | DXA34_01840 | Not Available | Positive | 372080 - 372283 | 7221.82 |
| arac family transcriptional regulator | DXA34_01845 | Not Available | Positive | 372288 - 373169 | 33341.4 |
| sodium:solute symporter family protein | DXA34_01850 | Not Available | Positive | 373198 - 374583 | 48611.8 |
| gamma-glutamyltransferase | DXA34_01855 | Not Available | Positive | 374603 - 376330 | 62345.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
