Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | DXA34_22580 | Not Available | Positive | 4824069 - 4825388 | 48633.2 |
| ncs2 family permease | DXA34_22585 | Not Available | Negative | 4825524 - 4826831 | 46108.2 |
| ncs2 family permease | DXA34_22590 | Not Available | Negative | 4827103 - 4828413 | 46945.9 |
| response regulator | DXA34_22595 | Not Available | Negative | 4828527 - 4829228 | 26358.7 |
| ghkl domain-containing protein | DXA34_22600 | Not Available | Negative | 4829206 - 4830816 | 59876.1 |
| duf3794 domain-containing protein | DXA34_22605 | Not Available | Negative | 4831493 - 4833046 | 57995.5 |
| trna 2-thiocytidine(32) synthetase ttca | DXA34_22610 | Not Available | Negative | 4833402 - 4834313 | 35290.7 |
| serine o-acetyltransferase | DXA34_22615 | Not Available | Negative | 4834358 - 4835068 | 25520.1 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DXA34_22620 | Not Available | Negative | 4835425 - 4836012 | 22286.3 |
| mechanosensitive ion channel family protein | DXA34_22625 | Not Available | Negative | 4836055 - 4836972 | 33208.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
