Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoinase allb | DXA34_22420 | Not Available | Negative | 4794313 - 4795725 | 52376.8 |
| lysr family transcriptional regulator | DXA34_22425 | Not Available | Positive | 4795971 - 4796891 | 34710.7 |
| citrate transporter | DXA34_22430 | Not Available | Negative | 4797091 - 4798395 | 46858.3 |
| dna-binding response regulator | DXA34_22435 | Not Available | Positive | 4798614 - 4799309 | 25998.7 |
| response regulator | DXA34_22440 | Not Available | Positive | 4799490 - 4802309 | 107464.0 |
| threonine--trna ligase | DXA34_22450 | Not Available | Positive | 4803144 - 4805105 | 75348.7 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | DXA34_22455 | Not Available | Negative | 4805196 - 4805750 | 20933.9 |
| anaerobic ribonucleoside-triphosphate reductase | DXA34_22460 | Not Available | Negative | 4805760 - 4807937 | 82427.2 |
| hypothetical protein | DXA34_22465 | Not Available | Negative | 4808112 - 4808291 | 6661.79 |
| degv family protein | DXA34_22470 | Not Available | Negative | 4808314 - 4809147 | 30706.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
